Browse of TCMCG007C33197 protein

CDS

Accession Number	TCMCG007C33197
gbkey	CDS
Protein Id	XP_009146032.1
Location	complement(join(22242366..22242432,22242580..22242669,22242756..22242827,22242922..22242995,22243085..22243165,22243261..22243350,22243439..22243609,22243730..22243796,22243883..22243950,22244060..22244158,22244251..22244376,22244518..22244664,22244795..22244881,22244986..22245069,22245164..22245304,22245558..22245654,22245790..22246085,22246193..22246308,22246423..22246504,22246602..22246784,22246971..22247153,22247280..22247463,22247607..22247718,22248079..22248206,22248321..22248418,22248805..22248963))
Gene	LOC103869709
GeneID	103869709
Organism	Brassica rapa

Protein

Length	1033aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009147784.3
Definition	E3 ubiquitin-protein ligase UPL6 isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Ubiquitin-protein ligase
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K10589        [VIEW IN KEGG]
EC	2.3.2.26        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04120        [VIEW IN KEGG] map04120        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004842        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006464        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016567        [VIEW IN EMBL-EBI] GO:0016740        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019787        [VIEW IN EMBL-EBI] GO:0032446        [VIEW IN EMBL-EBI] GO:0036211        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044267        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0061630        [VIEW IN EMBL-EBI] GO:0061659        [VIEW IN EMBL-EBI] GO:0070647        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTTTTTCTCCGGCGATCCGTCGACTCGGAAGCGAGTTGATTTAGGTGGTCGGAGCACTAAGGAGAGAGATGCTCCGAAGCTTCTGGAGCAGACGAGGATGGAGCGGAATCGCCGTCTGCTTCAGAAGCAACAGAATGCCGCTGCCCTCAAAATTCAGAAATTCTTTAGAGGTAGAAGATCAGTGGCCATTGAGCGCTCCAAGGTGAGGCGTGAGTTCTGTGAAACCTATGGGAATAATTGCCAGAATGTTGACAGGAATTGCTTTGAGCCAGGTTCAAGTTTCCTCCGTCAGTTACTGTTTTTCTTCAAGGCACAAAACTCGGGAGATTTTGTGATACTTGTGGAGACGTGTCGCCTACTGAAAATTTTTACTCACAGCAATGGTGACATTCTCAGCCTTTTCTCTGGCTTGGACTATTCCGCTGAGCATAACTTGGTGGATTTTAGAGTAAAGAAACTTGCTTTTACCTGCATCGATGCTATACATCATAATAGCAGGGACCGTTTAAGGGATCAGCTGTTAGTTACTACTGAAGAAGCTAGCACCTCAACAGCTATCTTGATGGAGGCGATGTCATTGGTGCTAGATCCTAAGCTGCCTTGGGTTTGCAAAACTGTGAGTTATCTACAGAAAAGACACATATTCCAACTAGTCAGAGATATCGTCATTACAGCTAAGGAAAGCCCTAGAGGCCAGACTATGATCGGTAGCATTCTTTCACTAGAAAGAGTATTAATCCTGGTAGTAACTCATGTTGGCCGTGAGCCATGTTGCTGCCCTGTTGTTGATCCACGTTGGAGTTTCTCATCTATGATCCTTACAATACCCTTGATATGGCAGCTCTTCCCAAACCTGAAAGTGGTCTTTGCCAACCCGAATCTAAGTCAACACTACATTCACCAGATGGCTTTCTGTATTCAAAAAGATACCCATGTCCTCCCAACAGATACAAGCGCAGAGTTTCCAGGTTATGCTTGTCTTCTTGGTAATACGTTGGAAACTGCAAATGTGGTGTTGTCACAGCCTGACTGTTCATTGGATATGGCAGTTGACATTGCATCAGTTGCAACTTTCTTGTTAGAGAGACTTCCTCCTGTGAAGTCATCAGAAAGAGAAAGCAAACAGAGCTCTTCTGAGGAGGATGATATGTTGATTGACGATATACCAGAATTCGTCTTGAATAAGACTCTGGAGCAGCAGATAACCACCAATGCTATAGACTCACGTTTTCTTCTGCAGTTAACAAATGTTTTGTTCCATCAAGTTTCGCTTGGTACGCAGCCATATGATGAAGAAAAAGAAGCACGAGCTATTGGCACAGCCAGTTCTTTTCTGTATGCAGCATTCAACACCCTCCCTCTTGAGAGAATCATGACAGTTTTAGCTTATAGAACCGAGCTTGTAATTGTGTTGTGGAATTATATGAAACGATGCCATGAGAACCAGAAGTGGTCATCCATGCCTAATCTCCTAGCTTACCTTCCAGGAGATGCTCCGGGTTGGCTATTACCTCTGGTTGTTTTTTGTCCTGTTTATAAGCATATGCTTATGATAGTCGACAATGAGGAGTTTTACGAGCGAGAGAAGCCACTGTCGCTACAAGATATCAGATTGCTTATCATCATTCTCAAGCAAGCTTTATGGCAGTTACTATGGGTGAATCCACTTACGCAGCCTAGCACGGGGAAATCTGTCTCCAACAACCTCTCAAAGAAGAACCCTGTTGGCTTGATTCAGAACAGGGCTGGGGTTGTAGTTGCTGAATTACTTTCACAGTTACAAGATTGGAACAACCGGCAACAATTCACTTCCTCGAGCGATTTCCAAGCTGATACAGTCAATGAATATTTTATCTCTCAGGCAATAGCGGAAGGTACAAGAGCCAACTACATACTGATGCACGCTCCTTTCCTGATTCCGTTTACAAGCAGAGTCAAGATATTCACAACACAATTAGCAACGGCGAGGGAGAGTCATGATCATGGATCTCAAGCCATTTTTGCTCGAAATCGGTTCAGAATACGAAGAGATCACATCTTGGAAGATGCTTACAATCAAATGAGTGCATTGTCAGAAGATGATCTCCGGGGATCGATCCGCGTGACATTTGTCAATGAACTTGGAGTTGAGGAAGCTGGTATTGATGGTGGTGGCATTTTTAAAGACTTCATGGAGAAAATTACCCGAGCAGCCTTTGATGTGCAATATGGGTTGTTTAAGGAGACCGTTGATCACATGCTTTATCCTAATCCTGGATCAGGAATGGTACATGACCAGCATCTCCAGTTCTTTCATTTTCTCGGCACTCTTCTCGCAAAAGCTATGTTTGAAGGGATTCTAGTTGATATACCATTTGCAACTTTTTTCCTCAGCAAATTAAAACACAAGTACAACTATTTGAACGATTTGCCTTCTCTGGATCCTGAGTTGTATAAGCATCTTATATTTCTGAAGCGTTATAAGGGTAATATCGCAGAGTTGGAGCTTTACTTTGTTATTCTCAACAACGAATATGGAGAGAGGACAGAGGAAGAGTTACTTCCAGGGGGTAAAGACATGCGGGTTACAAATGAGAATGTTATAACTTTCATTCATCTGGTTTCAAATCATCGGTTGAATTTTCAGATACGCCAACAGAGTTCTCATTTCTTGAGAGGGTTTCAGCAACTCATTCCAAAAGAATGTATCGACATGTTCAATGAACATGAGCTTCAGGTTCTTATATCTGGTTCAGCTGATAGTTTGGATATTGACGACTTGCGTCAGAACACTAACTATACAGGAGGCTACAACGCTGGACATTATGTGATTGATATGTTCTGGGAAGTTCTGAAAAGCTTCTCAACCGAAAACCAGAAGAAGTTCTTAAAATTTGTGACAGGCTGTTCGAGAGGACCACTGCTTGGTTTCAAATACTTGGAACCTGCATTCTGTATACAGAGGGCTGCGGGTAGCGCGAGTAATGAAGCAGTTGATAGACTACCTACATCAGCCACTTGTATGAACCTTCTCAAGCTTCCTCCCTATCAAAGCAAAGAGCAACTTGAGACCAAATTGATGTACGCCATAAGCGCAGAAGCAGGTTTTGACCTGAGCTGA

Protein:   MFFSGDPSTRKRVDLGGRSTKERDAPKLLEQTRMERNRRLLQKQQNAAALKIQKFFRGRRSVAIERSKVRREFCETYGNNCQNVDRNCFEPGSSFLRQLLFFFKAQNSGDFVILVETCRLLKIFTHSNGDILSLFSGLDYSAEHNLVDFRVKKLAFTCIDAIHHNSRDRLRDQLLVTTEEASTSTAILMEAMSLVLDPKLPWVCKTVSYLQKRHIFQLVRDIVITAKESPRGQTMIGSILSLERVLILVVTHVGREPCCCPVVDPRWSFSSMILTIPLIWQLFPNLKVVFANPNLSQHYIHQMAFCIQKDTHVLPTDTSAEFPGYACLLGNTLETANVVLSQPDCSLDMAVDIASVATFLLERLPPVKSSERESKQSSSEEDDMLIDDIPEFVLNKTLEQQITTNAIDSRFLLQLTNVLFHQVSLGTQPYDEEKEARAIGTASSFLYAAFNTLPLERIMTVLAYRTELVIVLWNYMKRCHENQKWSSMPNLLAYLPGDAPGWLLPLVVFCPVYKHMLMIVDNEEFYEREKPLSLQDIRLLIIILKQALWQLLWVNPLTQPSTGKSVSNNLSKKNPVGLIQNRAGVVVAELLSQLQDWNNRQQFTSSSDFQADTVNEYFISQAIAEGTRANYILMHAPFLIPFTSRVKIFTTQLATARESHDHGSQAIFARNRFRIRRDHILEDAYNQMSALSEDDLRGSIRVTFVNELGVEEAGIDGGGIFKDFMEKITRAAFDVQYGLFKETVDHMLYPNPGSGMVHDQHLQFFHFLGTLLAKAMFEGILVDIPFATFFLSKLKHKYNYLNDLPSLDPELYKHLIFLKRYKGNIAELELYFVILNNEYGERTEEELLPGGKDMRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIPKECIDMFNEHELQVLISGSADSLDIDDLRQNTNYTGGYNAGHYVIDMFWEVLKSFSTENQKKFLKFVTGCSRGPLLGFKYLEPAFCIQRAAGSASNEAVDRLPTSATCMNLLKLPPYQSKEQLETKLMYAISAEAGFDLS